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RECOMB
2007
Springer
16 years 7 months ago
Beyond Galled Trees - Decomposition and Computation of Galled Networks
Reticulate networks are a type of phylogenetic network that are used to represent reticulate evolution involving hybridization, horizontal gene transfer or recombination. The simpl...
Daniel H. Huson, Tobias H. Klöpper
RECOMB
2007
Springer
16 years 7 months ago
Protein Conformational Flexibility Analysis with Noisy Data
Abstract. Protein conformational changes play a critical role in biological functions such as ligand-protein and protein-protein interactions. Due to the noise in structural data, ...
Anshul Nigham, David Hsu
RECOMB
2007
Springer
16 years 7 months ago
GIMscan: A New Statistical Method for Analyzing Whole-Genome Array CGH Data
Genetic instability represents an important type of biological markers for cancer and many other diseases. Array Comparative Genome Hybridization (aCGH) is a high-throughput cytoge...
Yanxin Shi, Fan Guo, Wei Wu, Eric P. Xing
VLDB
2007
ACM
114views Database» more  VLDB 2007»
16 years 6 months ago
Optimization and evaluation of shortest path queries
We investigate the problem of how to evaluate efficiently a collection of shortest path queries on massive graphs that are too big to fit in the main memory. To evaluate a shortes...
Edward P. F. Chan, Heechul Lim
SIGMOD
2007
ACM
181views Database» more  SIGMOD 2007»
16 years 6 months ago
Progressive and selective merge: computing top-k with ad-hoc ranking functions
The family of threshold algorithm (i.e., TA) has been widely studied for efficiently computing top-k queries. TA uses a sort-merge framework that assumes data lists are pre-sorted...
Dong Xin, Jiawei Han, Kevin Chen-Chuan Chang