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IPPS
2008
IEEE
16 years 25 days ago
SWAMP: Smith-Waterman using associative massive parallelism
One of the most commonly used tools by computational biologists is some form of sequence alignment. Heuristic alignment algorithms developed for speed and their multiple results s...
Shannon Steinfadt, Johnnie W. Baker
IPPS
2008
IEEE
16 years 25 days ago
Improving software reliability and productivity via mining program source code
A software system interacts with third-party libraries through various APIs. Insufficient documentation and constant refactorings of third-party libraries make API library reuse ...
Tao Xie, Mithun Acharya, Suresh Thummalapenta, Kun...
IPPS
2008
IEEE
16 years 25 days ago
Scalable data dissemination using hybrid methods
Web server scalability can be greatly enhanced via hybrid data dissemination methods that use both unicast and multicast. Hybrid data dissemination is particularly promising due t...
Wenhui Zhang, Vincenzo Liberatore, Jonathan Beaver...
IPPS
2008
IEEE
16 years 25 days ago
Model-guided performance tuning of parameter values: A case study with molecular dynamics visualization
In this paper, we consider the interaction between application programmers and tools that automatically search a space of application-level parameters that are believed to impact ...
Yiinju L. Nelson, Bhupesh Bansal, Mary W. Hall, Ai...
IRI
2008
IEEE
16 years 25 days ago
Towards an integrated modeling and simulation framework for freight transportation in metropolitan areas
Freight transportation at distribution nodes such as marine ports, airports and rail yards has been putting tremendous environmental pressure in metropolitan areas. A prerequisite...
Qunzhi Zhou, Amol Bakshi, Viktor K. Prasanna, Rama...