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JBCB
2006
60views more  JBCB 2006»
15 years 6 months ago
Efficient Algorithms and Software for Detection of Full-length Ltr Retrotransposons
LTR retrotransposons constitute one of the most abundant classes of repetitive elements in eukaryotic genomes. In this paper, we present a new algorithm for detection of full-leng...
Anantharaman Kalyanaraman, Srinivas Aluru
JCC
2006
103views more  JCC 2006»
15 years 6 months ago
Flooding in GROMACS: Accelerated barrier crossings in molecular dynamics
: The major bottleneck of today's atomistic molecular dynamics (MD) simulations is that because of the enormous computational effort involved, only processes at nanoseconds to...
Oliver F. Lange, Lars V. Schäfer, Helmut Grub...
JCM
2006
92views more  JCM 2006»
15 years 6 months ago
Ultimate Dynamic Spectrum Allocation via User-Central Wireless Systems
- Current wireless systems are called vendor-central systems because, users should subscribe to a service provider (vendor) and receive the service through the spectrum assigned to...
Seyed Alireza Zekavat, Xiukui Li
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JCM
2006
112views more  JCM 2006»
15 years 6 months ago
A Peer-to-Peer Cooperation Enhancement Scheme and its Performance Analysis
The performance of peer-to-peer systems depends on the level of cooperation of the system's participants. While most existing peer-to-peer architectures have assumed that user...
Wei-Cherng Liao, Fragkiskos Papadopoulos, Konstant...
JCO
2006
126views more  JCO 2006»
15 years 6 months ago
Combinatorics of TCP reordering
We study a combinatorial problem motivated by a receiver-oriented model of TCP traffic from [7], that incorporates information on both arrival times, and the dynamics of packet IDs...
Anders Hansson, Gabriel Istrate, Shiva Prasad Kasi...