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IJBRA
2006
111views more  IJBRA 2006»
15 years 6 months ago
Memory efficient alignment between RNA sequences and stochastic grammar models of pseudoknots
: Stochastic Context-Free Grammars (SCFG) has been shown to be effective in modelling RNA secondary structure for searches. Our previous work (Cai et al., 2003) in Stochastic Paral...
Yinglei Song, Chunmei Liu, Russell L. Malmberg, Co...
IJDMB
2006
90views more  IJDMB 2006»
15 years 6 months ago
An efficient motif discovery algorithm with unknown motif length and number of binding sites
: Most motif discovery algorithms from DNA sequences require the motif's length as input. Styczynski et al. introduced the Extended (l,d)-Motif Problem (EMP) where the motif&#...
Henry C. M. Leung, Francis Y. L. Chin
IJHPCA
2006
105views more  IJHPCA 2006»
15 years 6 months ago
Advances, Applications and Performance of the Global Arrays Shared Memory Programming Toolkit
This paper describes capabilities, evolution, performance, and applications of the Global Arrays (GA) toolkit. GA was created to provide application programmers with an interface ...
Jarek Nieplocha, Bruce Palmer, Vinod Tipparaju, Ma...
IJIS
2006
44views more  IJIS 2006»
15 years 6 months ago
Optimal choice of granularity in commonsense estimation: Why half-orders of magnitude?
It has been observed that when people make crude estimates, they feel comfortable choosing between alternatives which differ by a half-order of magnitude (e.g., were there 100, 30...
Jerry R. Hobbs, Vladik Kreinovich
IJNSEC
2006
132views more  IJNSEC 2006»
15 years 6 months ago
A Fast Semantically Secure Public Key Cryptosystem Based on Factoring
The cryptosystem proposed by Koyama is not semantically secure. Also, it is not secure against partial known plaintext attack, linearly related plaintext attack and low exponent a...
Sahadeo Padhye, Birendra Kumar Sharma