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PRL
2011
14 years 9 months ago
Structural matching of 2D electrophoresis gels using deformed graphs
2D electrophoresis is a well known method for protein separation which is extremely useful in the field of proteomics. Each spot in the image represents a protein accumulation an...
Alexandre Noma, Alvaro Pardo, Roberto Marcondes Ce...
JMLR
2012
13 years 9 months ago
Krylov Subspace Descent for Deep Learning
In this paper, we propose a second order optimization method to learn models where both the dimensionality of the parameter space and the number of training samples is high. In ou...
Oriol Vinyals, Daniel Povey
BMCBI
2010
132views more  BMCBI 2010»
15 years 6 months ago
New statistical potential for quality assessment of protein models and a survey of energy functions
Background: Scoring functions, such as molecular mechanic forcefields and statistical potentials are fundamentally important tools in protein structure modeling and quality assess...
Dmitry Rykunov, András Fiser
ESOP
2010
Springer
16 years 3 months ago
Parameterized Memory Models and Concurrent Separation Logic
Formal reasoning about concurrent programs is usually done with the assumption that the underlying memory model is sequentially consistent, i.e. the execution outcome is equivalen...
Rodrigo Ferreira, Xinyu Feng and Zhong Shao
TCC
2010
Springer
176views Cryptology» more  TCC 2010»
16 years 3 months ago
Ideal Hierarchical Secret Sharing Schemes
The search of efficient constructions of ideal secret sharing schemes for families of nonthreshold access structures that may have useful applications has attracted a lot of atten...
Oriol Farràs, Carles Padró