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BMCBI
2007
134views more  BMCBI 2007»
15 years 6 months ago
Efficient pairwise RNA structure prediction using probabilistic alignment constraints in Dynalign
Background: Joint alignment and secondary structure prediction of two RNA sequences can significantly improve the accuracy of the structural predictions. Methods addressing this p...
Arif Ozgun Harmanci, Gaurav Sharma, David H. Mathe...
JCB
2007
198views more  JCB 2007»
15 years 6 months ago
Bayesian Hierarchical Model for Large-Scale Covariance Matrix Estimation
Many bioinformatics problems can implicitly depend on estimating large-scale covariance matrix. The traditional approaches tend to give rise to high variance and low accuracy esti...
Dongxiao Zhu, Alfred O. Hero III
IPPS
2007
IEEE
16 years 26 days ago
Formal Analysis for Debugging and Performance Optimization of MPI
High-end computing is universally recognized to be a strategic tool for leadership in science and technology. A significant portion of high-end computing is conducted on clusters...
Ganesh Gopalakrishnan, Robert M. Kirby
KBSE
2007
IEEE
16 years 25 days ago
Improving evolutionary class testing in the presence of non-public methods
Automating the generation of object-oriented unit tests is a challenging task. This is mainly due to the complexity and peculiarities that the principles of object-orientation imp...
Stefan Wappler, Ina Schieferdecker
CIKM
2007
Springer
16 years 22 days ago
Ontology module extraction for ontology reuse: an ontology engineering perspective
Problems resulting from the management of shared, distributed knowledge has led to ontologies being employed as a solution, in order to effectively integrate information across a...
Paul Doran, Valentina A. M. Tamma, Luigi Iannone