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FUN
2010
Springer
312views Algorithms» more  FUN 2010»
15 years 11 months ago
On Table Arrangements, Scrabble Freaks, and Jumbled Pattern Matching
Given a string s, the Parikh vector of s, denoted p(s), counts the multiplicity of each character in s. Searching for a match of Parikh vector q (a “jumbled string”) in the tex...
Peter Burcsi, Ferdinando Cicalese, Gabriele Fici, ...
BMCBI
2010
100views more  BMCBI 2010»
15 years 6 months ago
MapMi: automated mapping of microRNA loci
Background: A large effort to discover microRNAs (miRNAs) has been under way. Currently miRBase is their primary repository, providing annotations of primary sequences, precursors...
José Afonso Guerra-Assunção, ...
DLT
2010
15 years 8 months ago
Around Dot Depth Two
It is known that the languages definable by formulae of the logics FO2[<,S], 2[<,S], LTL[F,P,X,Y] are exactly the variety DAD. Automata for this class are not known, nor is i...
Kamal Lodaya, Paritosh K. Pandya, Simoni S. Shah
BMCBI
2010
90views more  BMCBI 2010»
15 years 6 months ago
PuTmiR: A database for extracting neighboring transcription factors of human microRNAs
Background: Some of the recent investigations in systems biology have revealed the existence of a complex regulatory network between genes, microRNAs (miRNAs) and transcription fa...
Sanghamitra Bandyopadhyay, Malay Bhattacharyya
SPAA
2010
ACM
15 years 11 months ago
Tree network coding for peer-to-peer networks
Partitioning is the dominant technique to transmit large files in peer-to-peer networks. A peer can redistribute each part immediately after its download. BitTorrent combines thi...
Arne Vater, Christian Schindelhauer, Christian Ort...