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BMCBI
2007
144views more  BMCBI 2007»
15 years 6 months ago
Motif kernel generated by genetic programming improves remote homology and fold detection
Background: Protein remote homology detection is a central problem in computational biology. Most recent methods train support vector machines to discriminate between related and ...
Tony Håndstad, Arne J. H. Hestnes, Pål...
BMCBI
2007
151views more  BMCBI 2007»
15 years 6 months ago
The Genopolis Microarray Database
Background: Gene expression databases are key resources for microarray data management and analysis and the importance of a proper annotation of their content is well understood. ...
Andrea Splendiani, Marco Brandizi, Gael Even, Otta...
COMBINATORICA
2007
126views more  COMBINATORICA 2007»
15 years 6 months ago
Privileged users in zero-error transmission over a noisy channel
The k-th power of a graph G is the graph whose vertex set is V (G)k , where two distinct ktuples are adjacent iff they are equal or adjacent in G in each coordinate. The Shannon ...
Noga Alon, Eyal Lubetzky
BIOINFORMATICS
2005
110views more  BIOINFORMATICS 2005»
15 years 6 months ago
Classification of oligonucleotide fingerprints: application for microbial community and gene expression analyses
Oligonucleotide fingerprinting is an array-based approach used for analysis of microbial community composition and gene expression profiling. Oligonucleotide fingerprinting of rib...
Katechan Jampachaisri, Lea Valinsky, James Bornema...
BIOINFORMATICS
2005
93views more  BIOINFORMATICS 2005»
15 years 6 months ago
Donuts, scratches and blanks: robust model-based segmentation of microarray images
Inner holes, artifacts and blank spots are common in microarray images, but current image analysis methods do not pay them enough attention. We propose a new robust model-based me...
Qunhua Li, Chris Fraley, Roger Eugene Bumgarner, K...