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AAAI
2010
15 years 8 months ago
Computationally Feasible Automated Mechanism Design: General Approach and Case Studies
In many multiagent settings, a decision must be made based on the preferences of multiple agents, and agents may lie about their preferences if this is to their benefit. In mechan...
Mingyu Guo, Vincent Conitzer
BMCBI
2010
106views more  BMCBI 2010»
15 years 6 months ago
A computational evaluation of over-representation of regulatory motifs in the promoter regions of differentially expressed genes
Background: Observed co-expression of a group of genes is frequently attributed to co-regulation by shared transcription factors. This assumption has led to the hypothesis that pr...
Guofeng Meng, Axel Mosig, Martin Vingron
166
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BMCBI
2010
124views more  BMCBI 2010»
15 years 6 months ago
Estimation and efficient computation of the true probability of recurrence of short linear protein sequence motifs in unrelated
Background: Large datasets of protein interactions provide a rich resource for the discovery of Short Linear Motifs (SLiMs) that recur in unrelated proteins. However, existing met...
Norman E. Davey, Richard J. Edwards, Denis C. Shie...
BMCBI
2010
175views more  BMCBI 2010»
15 years 6 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
JBI
2010
212views Bioinformatics» more  JBI 2010»
15 years 1 months ago
Cloud computing: A new business paradigm for biomedical information sharing
We examine how the biomedical informatics (BMI) community, especially consortia that share data and applications, can take advantage of a new resource called cloud computing. Clou...
Arnon Rosenthal, Peter Mork, Maya Hao Li, Jean Sta...