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RECOMB
2008
Springer
16 years 7 months ago
Detecting Disease-Specific Dysregulated Pathways Via Analysis of Clinical Expression Profiles
We present a method for identifying connected gene subnetworks significantly enriched for genes that are dysregulated in specimens of a disease. These subnetworks provide a signat...
Igor Ulitsky, Richard M. Karp, Ron Shamir
RECOMB
2008
Springer
16 years 7 months ago
Rapid and Accurate Protein Side Chain Prediction with Local Backbone Information
High-accuracy protein structure modeling demands accurate and very fast side chain prediction since such a procedure must be repeatedly called at each step of structure refinement....
Jing Zhang, Xin Gao, Jinbo Xu, Ming Li
RECOMB
2008
Springer
16 years 7 months ago
High-Resolution Modeling of Cellular Signaling Networks
A central challenge in systems biology is the reconstruction of biological networks from high-throughput data sets. A particularly difficult case of this is the inference of dynami...
Michael Baym, Chris Bakal, Norbert Perrimon, Bonni...
OSDI
2008
ACM
16 years 6 months ago
Run-time Energy Consumption Estimation Based on Workload in Server Systems
This paper proposes to develop a system-wide energy consumption model for servers by making use of hardware performance counters and experimental measurements. We develop a real-t...
Adam Lewis, Soumik Ghosh, Nian-Feng Tzeng
OSDI
2008
ACM
16 years 6 months ago
HiLighter: Automatically Building Robust Signatures of Performance Behavior for Small- and Large-Scale Systems
Previous work showed that statistical analysis techniques could successfully be used to construct compact signatures of distinct operational problems in Internet server systems. B...
Armando Fox, Moisés Goldszmidt, Peter Bod&i...