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BMCBI
2011
15 years 1 months ago
A discriminative method for family-based protein remote homology detection that combines inductive logic programming and proposi
Background: Remote homology detection is a hard computational problem. Most approaches have trained computational models by using either full protein sequences or multiple sequenc...
Juliana S. Bernardes, Alessandra Carbone, Gerson Z...
BMCBI
2011
15 years 1 months ago
AnyExpress: Integrated toolkit for analysis of cross-platform gene expression data using a fast interval matching algorithm
Background: Cross-platform analysis of gene express data requires multiple, intricate processes at different layers with various platforms. However, existing tools handle only a s...
Jihoon Kim, Kiltesh Patel, Hyunchul Jung, Winston ...
BMCBI
2011
15 years 1 months ago
Meta-analysis of gene expression microarrays with missing replicates
Background: Many different microarray experiments are publicly available today. It is natural to ask whether different experiments for the same phenotypic conditions can be combin...
Fan Shi, Gad Abraham, Christopher Leckie, Izhak Ha...
BSL
2011
15 years 1 months ago
Combinatorial dichotomies in set theory
show that an abstract analysis of one of these three set theoretic principles can sometimes lead us to results that do not require additional axioms at all but which could have bee...
Stevo Todorcevic
CCR
2011
15 years 1 months ago
Measured impact of crooked traceroute
Data collected using traceroute-based algorithms underpins research into the Internet’s router-level topology, though it is possible to infer false links from this data. One sou...
Matthew J. Luckie, Amogh Dhamdhere, kc claffy, Dav...