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IJBRA
2006
111views more  IJBRA 2006»
15 years 6 months ago
Memory efficient alignment between RNA sequences and stochastic grammar models of pseudoknots
: Stochastic Context-Free Grammars (SCFG) has been shown to be effective in modelling RNA secondary structure for searches. Our previous work (Cai et al., 2003) in Stochastic Paral...
Yinglei Song, Chunmei Liu, Russell L. Malmberg, Co...
JSAC
2006
107views more  JSAC 2006»
15 years 6 months ago
Distributed interference compensation for wireless networks
We consider a distributed power control scheme for wireless ad hoc networks, in which each user announces a price that reflects compensation paid by other users for their interfere...
Jianwei Huang, Randall A. Berry, Michael L. Honig
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ROBOTICA
2008
100views more  ROBOTICA 2008»
15 years 6 months ago
A symbolic approach to polyhedral scene analysis by parametric calotte propagation
Polyhedral scene analysis studies whether a 2D line drawing of a 3D polyhedron is realizable in the space, and if so, parameterizing the space of all possible realizations. For gen...
Hongbo Li, Lina Zhao, Ying Chen
JIB
2010
90views more  JIB 2010»
15 years 5 months ago
Enhancing Data Integration with Text Analysis to Find Proteins Implicated in Plant Stress Response
s text mining techniques over Medline abstracts as a method for accessing both these bodies of evidence in a consistent way. In an example use case, we apply our method to create a...
Keywan Hassani-Pak, Roxane Legaie, Catherine Canev...
IJFCS
2006
91views more  IJFCS 2006»
15 years 6 months ago
Bit-parallel Computation of Local Similarity Score Matrices with Unitary Weights
Abstract. Local similarity computation between two sequences permits detecting all the relevant alignments present between subsequences thereof. A well-known dynamic programming al...
Heikki Hyyrö, Gonzalo Navarro