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BMCBI
2006
146views more  BMCBI 2006»
15 years 6 months ago
A critical review of PASBio's argument structures for biomedical verbs
Background: Propositional representations of biomedical knowledge are a critical component of most aspects of semantic mining in biomedicine. However, the proper set of propositio...
K. Bretonnel Cohen, Lawrence Hunter
BMCBI
2006
106views more  BMCBI 2006»
15 years 6 months ago
Prediction of the functional class of metal-binding proteins from sequence derived physicochemical properties by support vector
Metal-binding proteins play important roles in structural stability, signaling, regulation, transport, immune response, metabolism control, and metal homeostasis. Because of their...
H. H. Lin, L. Y. Han, H. L. Zhang, C. J. Zheng, B....
BMCBI
2006
92views more  BMCBI 2006»
15 years 6 months ago
Systematic assignment of thermodynamic constraints in metabolic network models
Background: The availability of genome sequences for many organisms enabled the reconstruction of several genome-scale metabolic network models. Currently, significant efforts are...
Anne Kümmel, Sven Panke, Matthias Heinemann
BMCBI
2006
80views more  BMCBI 2006»
15 years 6 months ago
Quantification of the variation in percentage identity for protein sequence alignments
Background: Percentage Identity (PID) is frequently quoted in discussion of sequence alignments since it appears simple and easy to understand. However, although there are several...
G. P. S. Raghava, Geoffrey J. Barton
BMCBI
2006
81views more  BMCBI 2006»
15 years 6 months ago
A fisheye viewer for microarray-based gene expression data
Background: Microarray has been widely used to measure the relative amounts of every mRNA transcript from the genome in a single scan. Biologists have been accustomed to reading t...
Min Wu, Cheng Thao, Xiangming Mu, Ethan V. Munson