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BMCBI
2006
84views more  BMCBI 2006»
15 years 6 months ago
Phase analysis of circadian-related genes in two tissues
Background: Recent circadian clock studies using gene expression microarray in two different tissues of mouse have revealed not all circadian-related genes are synchronized in pha...
Delong Liu, Shyamal D. Peddada, Leping Li, Clarice...
BMCBI
2006
130views more  BMCBI 2006»
15 years 6 months ago
Identifying biological concepts from a protein-related corpus with a probabilistic topic model
Background: Biomedical literature, e.g., MEDLINE, contains a wealth of knowledge regarding functions of proteins. Major recurring biological concepts within such text corpora repr...
Bin Zheng, David C. McLean Jr, Xinghua Lu
BMCBI
2006
87views more  BMCBI 2006»
15 years 6 months ago
XML schemas for common bioinformatic data types and their application in workflow systems
Background: Today, there is a growing need in bioinformatics to combine available software tools into chains, thus building complex applications from existing single-task tools. T...
Philipp N. Seibel, Jan Krüger, Sven Hartmeier...
BMCBI
2006
67views more  BMCBI 2006»
15 years 6 months ago
A simple method to combine multiple molecular biomarkers for dichotomous diagnostic classification
Background: In spite of the recognized diagnostic potential of biomarkers, the quest for squelching noise and wringing in information from a given set of biomarkers continues. Her...
Manju R. Mamtani, Tushar P. Thakre, Mrunal Y. Kalk...
BMCBI
2006
71views more  BMCBI 2006»
15 years 6 months ago
MeMo: a hybrid SQL/XML approach to metabolomic data management for functional genomics
Background: The genome sequencing projects have shown our limited knowledge regarding gene function, e.g. S. cerevisiae has 5
Irena Spasic, Warwick B. Dunn, Giles Velarde, Andy...