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BMCBI
2010
150views more  BMCBI 2010»
15 years 6 months ago
Automatic structure classification of small proteins using random forest
Background: Random forest, an ensemble based supervised machine learning algorithm, is used to predict the SCOP structural classification for a target structure, based on the simi...
Pooja Jain, Jonathan D. Hirst
COR
2010
123views more  COR 2010»
15 years 6 months ago
Multi-dimensional bin packing problems with guillotine constraints
The problem addressed in this paper is the decision problem of determining if a set of multi-dimensional rectangular boxes can be orthogonally packed into a rectangular bin while ...
Rasmus Resen Amossen, David Pisinger
DAM
2010
66views more  DAM 2010»
15 years 6 months ago
On parse trees and Myhill-Nerode-type tools for handling graphs of bounded rank-width
Rank-width is a structural graph measure introduced by Oum and Seymour and aimed at better handling of graphs of bounded clique-width. We propose a formal mathematical framework an...
Robert Ganian, Petr Hlinený
DCG
2010
88views more  DCG 2010»
15 years 6 months ago
Computing the Shortest Essential Cycle
An essential cycle on a surface is a simple cycle that cannot be continuously deformed to a point or a single boundary. We describe algorithms to compute the shortest essential cy...
Jeff Erickson, Pratik Worah
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DM
2010
90views more  DM 2010»
15 years 6 months ago
The firefighter problem for cubic graphs
We show that the firefighter problem is NP-complete for cubic graphs. We also show that given a rooted tree of maximum degree three in which every leaf is the same distance from t...
Andrew King, Gary MacGillivray