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BMCBI
2010
161views more  BMCBI 2010»
15 years 6 months ago
BPDA - A Bayesian peptide detection algorithm for mass spectrometry
Background: Mass spectrometry (MS) is an essential analytical tool in proteomics. Many existing algorithms for peptide detection are based on isotope template matching and usually...
Youting Sun, Jianqiu Zhang, Ulisses Braga-Neto, Ed...
EAAI
2006
189views more  EAAI 2006»
15 years 6 months ago
Evolutionary algorithms for VLSI multi-objective netlist partitioning
The problem of partitioning appears in several areas ranging from VLSI, parallel programming, to molecular biology. The interest in finding an optimal partition especially in VLSI ...
Sadiq M. Sait, Aiman H. El-Maleh, Raslan H. Al-Aba...
SIAMIS
2010
283views more  SIAMIS 2010»
15 years 1 months ago
A General Framework for a Class of First Order Primal-Dual Algorithms for Convex Optimization in Imaging Science
We generalize the primal-dual hybrid gradient (PDHG) algorithm proposed by Zhu and Chan in [M. Zhu, and T. F. Chan, An Efficient Primal-Dual Hybrid Gradient Algorithm for Total Var...
Ernie Esser, Xiaoqun Zhang, Tony F. Chan
APPROX
2010
Springer
176views Algorithms» more  APPROX 2010»
15 years 8 months ago
Approximation Algorithms for Min-Max Generalization Problems
Abstract. We provide improved approximation algorithms for the minmax generalization problems considered by Du, Eppstein, Goodrich, and Lueker [1]. In min-max generalization proble...
Piotr Berman, Sofya Raskhodnikova
AAIM
2010
Springer
181views Algorithms» more  AAIM 2010»
15 years 9 months ago
Efficient Exact and Approximate Algorithms for the Complement of Maximal Strip Recovery
Given two genomic maps G and H represented by a sequence of n gene markers, a strip (syntenic block) is a sequence of distinct markers of length at least two which appear as subseq...
Binhai Zhu