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KDD
2002
ACM
125views Data Mining» more  KDD 2002»
16 years 7 months ago
Pattern discovery in sequences under a Markov assumption
In this paper we investigate the general problem of discovering recurrent patterns that are embedded in categorical sequences. An important real-world problem of this nature is mo...
Darya Chudova, Padhraic Smyth
155
Voted
RECOMB
2004
Springer
16 years 7 months ago
Chromosomal breakpoint re-use in the inference of genome sequence rearrangement
In order to apply gene-order rearrangement algorithms to the comparison of genome sequences, Pevzner and Tesler [9] bypass gene finding and ortholog identification, and use the or...
David Sankoff, Phil Trinh
RECOMB
2002
Springer
16 years 7 months ago
Combining pairwise sequence similarity and support vector machines for remote protein homology detection
One key element in understanding the molecular machinery of the cell is to understand the meaning, or function, of each protein encoded in the genome. A very successful means of i...
Li Liao, William Stafford Noble
DCC
2007
IEEE
16 years 6 months ago
A sequence approach to linear perfect hash families
A linear (qd, q, t)-perfect hash family of size s in a vector space V of order qd over a field F of order q consists of a set S = {1, . . . , s} of linear functionals from V to F ...
Susan G. Barwick, Wen-Ai Jackson
178
Voted
KDD
2009
ACM
169views Data Mining» more  KDD 2009»
16 years 1 months ago
On burstiness-aware search for document sequences
As the number and size of large timestamped collections (e.g. sequences of digitized newspapers, periodicals, blogs) increase, the problem of efficiently indexing and searching su...
Theodoros Lappas, Benjamin Arai, Manolis Platakis,...