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BMCBI
2006
242views more  BMCBI 2006»
15 years 6 months ago
Predicting residue-wise contact orders in proteins by support vector regression
Background: The residue-wise contact order (RWCO) describes the sequence separations between the residues of interest and its contacting residues in a protein sequence. It is a ne...
Jiangning Song, Kevin Burrage
ICDE
2003
IEEE
149views Database» more  ICDE 2003»
16 years 8 months ago
Indexing Weighted-Sequences in Large Databases
We present an index structure for managing weightedsequences in large databases. A weighted-sequence is defined as a two-dimensional structure where each element in the sequence i...
Haixun Wang, Chang-Shing Perng, Wei Fan, Sanghyun ...
RECOMB
2005
Springer
16 years 7 months ago
Consensus Folding of Unaligned RNA Sequences Revisited
As one of the earliest problems in computational biology, RNA secondary structure prediction (sometimes referred to as "RNA folding") problem has attracted attention agai...
Vineet Bafna, Haixu Tang, Shaojie Zhang
ICSE
2005
IEEE-ACM
16 years 7 months ago
Object naming analysis for reverse-engineered sequence diagrams
UML sequence diagrams are commonly used to represent object interactions in software systems. This work considers the problem of extracting UML sequence diagrams from existing cod...
Atanas Rountev, Beth Harkness Connell
ICIC
2009
Springer
16 years 1 months ago
Function Sequence Genetic Programming
Genetic Programming(GP) can obtain a program structure to solve complex problem. This paper presents a new form of Genetic Programming, Function Sequence Genetic Programming (FSGP)...
Shixian Wang, Yuehui Chen, Peng Wu