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BMCBI
2007
127views more  BMCBI 2007»
15 years 6 months ago
CORRIE: enzyme sequence annotation with confidence estimates
Using a previously developed automated method for enzyme annotation, we report the reannotation of the ENZYME database and the analysis of local error rates per class. In control ...
Benjamin Audit, Emmanuel D. Levy, Walter R. Gilks,...
SOFTWARE
2002
15 years 6 months ago
Temporal Probabilistic Concepts from Heterogeneous Data Sequences
We consider the problem of characterisation of sequences of heterogeneous symbolic data that arise from a common underlying temporal pattern. The data, which are subject to impreci...
Sally I. McClean, Bryan W. Scotney, Fiona Palmer
GIS
2008
ACM
16 years 7 months ago
The multi-rule partial sequenced route query
Trip planning search (TPS) represents an important class of queries in Geographic Information Systems (GIS). In many real-world applications, TPS requests are issued with a number...
Haiquan Chen, Wei-Shinn Ku, Min-Te Sun, Roger Zimm...
FOSSACS
2001
Springer
15 years 11 months ago
On Regular Message Sequence Chart Languages and Relationships to Mazurkiewicz Trace Theory
Hierarchical Message Sequence Charts are a well-established formalism to specify telecommunication protocols. In this model, numerous undecidability results were obtained recently ...
Rémi Morin
BMCBI
2008
128views more  BMCBI 2008»
15 years 7 months ago
Efficient computation of absent words in genomic sequences
Background: Analysis of sequence composition is a routine task in genome research. Organisms are characterized by their base composition, dinucleotide relative abundance, codon us...
Julia Herold, Stefan Kurtz, Robert Giegerich