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BMCBI
2006
159views more  BMCBI 2006»
15 years 6 months ago
MultiSeq: unifying sequence and structure data for evolutionary analysis
Background: Since the publication of the first draft of the human genome in 2000, bioinformatic data have been accumulating at an overwhelming pace. Currently, more than 3 million...
Elijah Roberts, John Eargle, Dan Wright, Zaida Lut...
BMCBI
2007
148views more  BMCBI 2007»
15 years 6 months ago
WeederH: an algorithm for finding conserved regulatory motifs and regions in homologous sequences
Background: This work addresses the problem of detecting conserved transcription factor binding sites and in general regulatory regions through the analysis of sequences from homo...
Giulio Pavesi, Federico Zambelli, Graziano Pesole
PRL
2007
108views more  PRL 2007»
15 years 6 months ago
Towards a measure of deformability of shape sequences
In this paper we develop a theory for characterizing how deformable a shape is given a sequence of its observations. We define a term called ‘‘deformability index’’ (DI) ...
Amit K. Roy Chowdhury
SOCO
2010
Springer
15 years 5 months ago
Automatic detection of trends in time-stamped sequences: an evolutionary approach
This paper presents an evolutionary algorithm for modeling the arrival dates in time-stamped data sequences such as newscasts, e-mails, IRC conversations, scientific journal artic...
Lourdes Araujo, Juan Julián Merelo Guerv&oa...
ICC
2007
IEEE
117views Communications» more  ICC 2007»
16 years 1 months ago
Applying Techniques from Frame Synchronization for Biological Sequence Analysis
— During the last years, the amount of genetic data available has increased rapidly which creates the demand for advanced techniques for their interpretation. In the following, w...
Johanna Weindl, Joachim Hagenauer