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ICASSP
2011
IEEE
14 years 10 months ago
Additive character sequences with small alphabets for compressed sensing matrices
Compressed sensing is a novel technique where one can recover sparse signals from the undersampled measurements. In this paper, a K × N measurement matrix for compressed sensing ...
Nam Yul Yu
HPDC
2010
IEEE
15 years 7 months ago
MPIPairwiseStatSig: parallel pairwise statistical significance estimation of local sequence alignment
Sequence comparison is considered as a cornerstone application in bioinformatics, which forms the basis of many other applications. In particular, pairwise sequence alignment is a...
Ankit Agrawal, Sanchit Misra, Daniel Honbo, Alok N...
BMCBI
2002
136views more  BMCBI 2002»
15 years 6 months ago
Making sense of EST sequences by CLOBBing them
Background: Expressed sequence tags (ESTs) are single pass reads from randomly selected cDNA clones. They provide a highly cost-effective method to access and identify expressed g...
John Parkinson, David B. Guiliano, Mark L. Blaxter
TIT
2002
91views more  TIT 2002»
15 years 6 months ago
On limited-delay lossy coding and filtering of individual sequences
Abstract--We continue the study of adaptive schemes for the sequential lossy coding of individual sequences which was recently initiated by Linder and Lugosi. Specifically, we cons...
Tsachy Weissman, Neri Merhav
BMCBI
2010
118views more  BMCBI 2010»
15 years 7 months ago
Bacillus anthracis genome organization in light of whole transcriptome sequencing
Emerging knowledge of whole prokaryotic transcriptomes could validate a number of theoretical concepts introduced in the early days of genomics. What are the rules connecting gene...
Jeffrey Martin, Wenhan Zhu, Karla D. Passalacqua, ...