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193
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JCB
2008
15 years 6 months ago
2008
We define new measures of sequence similarity for oligonucleotide probe design. These new measures incorporate the nearest neighbor k-stem motifs in their definition, but can be e...
157
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NAR
2006
15 years 6 months ago
2006
CorGen is a web server that measures long-range correlations in the base composition of DNA and generates random sequences with the same correlation parameters. Long-range correla...
153
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ALIFE
2005
15 years 6 months ago
2005
The DNA of some naturally competent species of bacteria contains a large number of evenly distributed copies of a short sequence. This highly overrepresented sequence is believed t...
291
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COMPGEOM
2011
ACM
14 years 10 months ago
2011
ACM
Forbidden substructure theorems have proved to be among of the most versatile tools in bounding the complexity of geometric objects and the running time of geometric algorithms. T...
199
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BMCBI
2007
15 years 6 months ago
2007
Background: RNA interference has revolutionized our ability to study the effects of altering the expression of single genes in mammalian (and other) cells through targeted knockdo...