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BMCBI
2005
90views more  BMCBI 2005»
15 years 6 months ago
An algorithm for the determination and quantification of components of nucleic acid mixtures based on single sequencing reaction
Background: Determination and quantification of nucleic acid components in a mixture is usually accomplished by microarray approaches, where the mixtures are hybridized against sp...
Alexander E. Pozhitkov, Kathryn Stemshorn, Diethar...
METMBS
2004
196views Mathematics» more  METMBS 2004»
15 years 8 months ago
An Open Problem in RNA Secondary Structure Prediction by the Comparative Approach
Abstract One approach to predict the secondary structure of RNA is the comparative approach. This approach is used when alignment of several homologous sequences of a RNA is availa...
Stefan Engelen, Fariza Tahi
BMCBI
2004
102views more  BMCBI 2004»
15 years 6 months ago
Detection of transposable elements by their compositional bias
Background: Transposable elements (TE) are mobile genetic entities present in nearly all genomes. Previous work has shown that TEs tend to have a different nucleotide composition ...
Olivier Andrieu, Anna-Sophie Fiston, Dominique Anx...
SDM
2008
SIAM
130views Data Mining» more  SDM 2008»
15 years 8 months ago
Mining Sequence Classifiers for Early Prediction
Supervised learning on sequence data, also known as sequence classification, has been well recognized as an important data mining task with many significant applications. Since te...
Zhengzheng Xing, Jian Pei, Guozhu Dong, Philip S. ...
BMCBI
2008
75views more  BMCBI 2008»
15 years 6 months ago
Re-searcher: a system for recurrent detection of homologous protein sequences
Background: Sequence searches are routinely employed to detect and annotate related proteins. However, a rapid growth of databases necessitates a frequent repetition of sequence s...
Valdemaras Repsys, Mindaugas Margelevicius, Ceslov...