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DAM
2006
106views more  DAM 2006»
15 years 6 months ago
Computational complexity of isothermic DNA sequencing by hybridization
In the paper, the computational complexity of several variants of the problem of isothermic DNA sequencing by hybridization, is analyzed. The isothermic sequencing is a recent met...
Jacek Blazewicz, Marta Kasprzak
IJBRA
2006
107views more  IJBRA 2006»
15 years 6 months ago
Probabilistic models for biological sequences: selection and Maximum Likelihood estimation
: Probabilistic models for biological sequences (DNA and proteins) are frequently used in bioinformatics. We describe statistical tests designed to detect the order of dependency a...
Svetlana Ekisheva, Mark Borodovsky
BIOINFORMATICS
2000
99views more  BIOINFORMATICS 2000»
15 years 6 months ago
GeneRAGE: a robust algorithm for sequence clustering and domain detection
Motivation: Efficient, accurate and automatic clustering of large protein sequence datasets, such as complete proteomes, into families, according to sequence similarity. Detection...
Anton J. Enright, Christos A. Ouzounis
IVC
2002
87views more  IVC 2002»
15 years 6 months ago
Critical motion sequences for the self-calibration of cameras and stereo systems with variable focal length
We consider the self-calibration problem for a moving camera whose intrinsic parameters are known, except the focal length, which may vary freely across different views. The condi...
Peter F. Sturm
191
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BMCBI
2002
137views more  BMCBI 2002»
15 years 6 months ago
ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files
Background: Functional genomics involves the parallel experimentation with large sets of proteins. This requires management of large sets of open reading frames as a prerequisite ...
Konrad Büssow, Steve Hoffmann, Volker Sievert