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BIBE
2006
IEEE
119views Bioinformatics» more  BIBE 2006»
16 years 26 days ago
Large Grain Size Stochastic Optimization Alignment
DNA sequence alignment is a critical step in identifying homology between organisms. The most widely used alignment program, ClustalW, is known to suffer from the local minima pro...
Perry Ridge, Hyrum Carroll, Dan Sneddon, Mark J. C...
BIBE
2006
IEEE
138views Bioinformatics» more  BIBE 2006»
16 years 26 days ago
Assigning Schema Labels Using Ontology And Hueristics
Bioinformatics data is growing at a phenomenal rate. Besides the exponential growth of individual databases, the number of data depositories is increasing too. Because of the comp...
Xuan Zhang, Ruoming Jin, Gagan Agrawal
CCGRID
2006
IEEE
16 years 26 days ago
Proposal of MPI Operation Level Checkpoint/Rollback and One Implementation
With the increasing number of processors in modern HPC(High Performance Computing) systems, there are two emergent problems to solve. One is scalability, the other is fault tolera...
Yuan Tang, Graham E. Fagg, Jack Dongarra
CGO
2006
IEEE
16 years 26 days ago
Thread-Shared Software Code Caches
Software code caches are increasingly being used to amortize the runtime overhead of dynamic optimizers, simulators, emulators, dynamic translators, dynamic compilers, and other t...
Derek Bruening, Vladimir Kiriansky, Timothy Garnet...
CGO
2006
IEEE
16 years 26 days ago
A Cross-Architectural Interface for Code Cache Manipulation
Software code caches help amortize the overhead of dynamic binary transformation by enabling reuse of transformed code. Since code caches contain a potentiallyaltered copy of ever...
Kim M. Hazelwood, Robert S. Cohn
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