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BMCBI
2006
175views more  BMCBI 2006»
15 years 6 months ago
Parameter estimation for stiff equations of biosystems using radial basis function networks
Background: The modeling of dynamic systems requires estimating kinetic parameters from experimentally measured time-courses. Conventional global optimization methods used for par...
Yoshiya Matsubara, Shinichi Kikuchi, Masahiro Sugi...
FPL
2010
Springer
188views Hardware» more  FPL 2010»
15 years 4 months ago
SeqHive: A Reconfigurable Computer Cluster for Genome Re-sequencing
We demonstrate how Field Programmable Gate Arrays (FPGAs) may be used to address the computing challenges associated with assembling genome sequences from recent ultra-high-through...
Kristian Stevens, Henry Chen, Terry Filiba, Peter ...
ICSE
2012
IEEE-ACM
13 years 8 months ago
Engineering and verifying requirements for programmable self-assembling nanomachines
—We propose an extension of van Lamsweerde’s goal-oriented requirements engineering to the domain of programmable DNA nanotechnology. This is a domain in which individual devic...
Robyn R. Lutz, Jack H. Lutz, James I. Lathrop, Tit...
IPCCC
1999
IEEE
15 years 10 months ago
Accurately modeling speculative instruction fetching in trace-driven simulation
Performance evaluation of modern, highly speculative, out-of-order microprocessors and the corresponding production of detailed, valid, accurate results have become serious challe...
R. Bhargava, L. K. John, F. Matus
TACAS
1998
Springer
81views Algorithms» more  TACAS 1998»
15 years 10 months ago
Formal Design and Analysis of a Gear Controller
In this paper, we report on an application of the validation and veri cation tool kit Uppaal in the design and analysis of a prototype gear controller, carried out in a joint proje...
Magnus Lindahl, Paul Pettersson, Wang Yi