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» Using probabilistic model checking in systems biology
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CVGIP
2006
171views more  CVGIP 2006»
15 years 6 months ago
Breathe easy: Model and control of human respiration for computer animation
In this paper, we detail an anatomically inspired, physically based model of the human torso designed for the visual simulation of respiration using a mixed system of rigid and de...
Victor B. Zordan, Bhrigu Celly, Bill Yuan-chi Chiu...
GECCO
2006
Springer
165views Optimization» more  GECCO 2006»
15 years 10 months ago
Comparing mathematical models on the problem of network inference
In this paper we address the problem of finding gene regulatory networks from experimental DNA microarray data. We focus on the evaluation of the performance of different mathemat...
Christian Spieth, Nadine Hassis, Felix Streichert
SIGSOFT
2008
ACM
16 years 7 months ago
Modular verification of web services using efficient symbolic encoding and summarization
We propose a novel method for modular verification of web service compositions. We first use symbolic fixpoint computations to derive conditions on the incoming messages and relat...
Fang Yu, Chao Wang, Aarti Gupta, Tevfik Bultan
BMCBI
2010
113views more  BMCBI 2010»
15 years 6 months ago
Prediction of FAD interacting residues in a protein from its primary sequence using evolutionary information
Background: Flavin binding proteins (FBP) plays a critical role in several biological functions such as electron transport system (ETS). These flavoproteins contain very tightly b...
Nitish K. Mishra, Gajendra P. S. Raghava
BMCBI
2006
141views more  BMCBI 2006»
15 years 6 months ago
Visual setup of logical models of signaling and regulatory networks with ProMoT
Background: The analysis of biochemical networks using a logical (Boolean) description is an important approach in Systems Biology. Recently, new methods have been proposed to ana...
Julio Saez-Rodriguez, Sebastian Mirschel, Rebecca ...