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» Using probabilistic model checking in systems biology
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ISMB
1993
15 years 7 months ago
Prediction of Primate Splice Junction Gene Sequences with a Cooperative Knowledge Acquisition System
Wepropose a cooperative conceptual modelling environment in which two agents interact : the machineand the humanexpert. Theformer is able to extract knowledge from data using a sy...
Engelbert Mephu Nguifo, Jean Sallantin
ENTCS
2007
82views more  ENTCS 2007»
15 years 6 months ago
A Simple Calculus for Proteins and Cells
The use of process calculi to represent biological systems has led to the design of different formalisms such as brane calculi and κ-calculus. Both have proved to be useful to m...
Cosimo Laneve, Fabien Tarissan
BMCBI
2007
146views more  BMCBI 2007»
15 years 6 months ago
Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
SSIRI
2010
15 years 4 months ago
Modelling and Implementing Complex Systems with Timebands
—We describe how to use a timeband architecture to model real-time requirements. The architecture separates requirements that use different time units, producing a family of mode...
Jim Woodcock, Marcel Oliveira, Alan Burns, Kun Wei
AI
2005
Springer
15 years 6 months ago
On the consistency of cardinal direction constraints
We present a formal model for qualitative spatial reasoning with cardinal directions utilizing a co-ordinate system. Then, we study the problem of checking the consistency of a se...
Spiros Skiadopoulos, Manolis Koubarakis