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SPAA
2009
ACM
16 years 3 months ago
A randomized, o(log w)-depth 2 smoothing network
A K-smoothing network is a distributed, low-contention data structure where tokens arrive arbitrarily on w input wires and reach w output wires via their completely asynchronous p...
Marios Mavronicolas, Thomas Sauerwald
ICS
2001
Tsinghua U.
15 years 11 months ago
Global optimization techniques for automatic parallelization of hybrid applications
This paper presents a novel technique to perform global optimization of communication and preprocessing calls in the presence of array accesses with arbitrary subscripts. Our sche...
Dhruva R. Chakrabarti, Prithviraj Banerjee
BMCBI
2007
102views more  BMCBI 2007»
15 years 6 months ago
Setting up a large set of protein-ligand PDB complexes for the development and validation of knowledge-based docking algorithms
Background: The number of algorithms available to predict ligand-protein interactions is large and ever-increasing. The number of test cases used to validate these methods is usua...
Luis A. Diago, Persy Morell, Longendri Aguilera, E...
CORR
2010
Springer
160views Education» more  CORR 2010»
15 years 6 months ago
Scalable Probabilistic Databases with Factor Graphs and MCMC
Incorporating probabilities into the semantics of incomplete databases has posed many challenges, forcing systems to sacrifice modeling power, scalability, or treatment of relatio...
Michael L. Wick, Andrew McCallum, Gerome Miklau
BMCBI
2006
115views more  BMCBI 2006»
15 years 6 months ago
MitoRes: a resource of nuclear-encoded mitochondrial genes and their products in Metazoa
Background: Mitochondria are sub-cellular organelles that have a central role in energy production and in other metabolic pathways of all eukaryotic respiring cells. In the last f...
Domenico Catalano, Flavio Licciulli, Antonio Turi,...
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