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BMCBI
2010
139views more  BMCBI 2010»
15 years 6 months ago
PoGO: Prediction of Gene Ontology terms for fungal proteins
Background: Automated protein function prediction methods are the only practical approach for assigning functions to genes obtained from model organisms. Many of the previously re...
Jaehee Jung, Gangman Yi, Serenella A. Sukno, Micha...
BMCBI
2005
154views more  BMCBI 2005»
15 years 6 months ago
GObar: A Gene Ontology based analysis and visualization tool for gene sets
Background: Microarray experiments, as well as other genomic analyses, often result in large gene sets containing up to several hundred genes. The biological significance of such ...
Jason S. M. Lee, Gurpreet Katari, Ravi Sachidanand...
SEMWEB
2007
Springer
16 years 20 days ago
SMART: A Web-Based, Ontology-Driven, Semantic Web Query Answering Application
SMART (Semantic web information Management with automated Reasoning Tool) is an open-source project, which aims to provide intuitive tools for life scientists for represent, integr...
Alexander De Leon Battista, Natalia Villanueva-Ros...
ICDE
2007
IEEE
125views Database» more  ICDE 2007»
16 years 8 months ago
Ontology-Based Constraint Recognition for Free-Form Service Requests
Automatic recognition and formalization of constraints from free-form service requests is a challenging problem. Its resolution would go a long way toward allowing users to make r...
Muhammed Al-Muhammed, David W. Embley
SSDBM
2008
IEEE
90views Database» more  SSDBM 2008»
16 years 28 days ago
Ontology Database: A New Method for Semantic Modeling and an Application to Brainwave Data
We propose an automatic method for modeling a relational database that uses SQL triggers and foreign-keys to efficiently answer positive semantic queries about ground instances for...
Paea LePendu, Dejing Dou, Gwen A. Frishkoff, Jiawe...