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BMCBI
2010
154views more  BMCBI 2010»
15 years 6 months ago
Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data
Background: A major goal of molecular biology is determining the mechanisms that control the transcription of genes. Motif Enrichment Analysis (MEA) seeks to determine which DNA-b...
Robert C. McLeay, Timothy L. Bailey
CP
2000
Springer
15 years 10 months ago
Expressiveness of Full First Order Constraints in the Algebra of Finite or Infinite Trees
We are interested in the expressiveness of constraints represented by general first order formulae, with equality as unique relation symbol and function symbols taken from an infi...
Alain Colmerauer, Thi-Bich-Hanh Dao
VMCAI
2010
Springer
16 years 3 months ago
Building a Calculus of Data Structures
Abstract. Techniques such as verification condition generation, preditraction, and expressive type systems reduce software verification to proving formulas in expressive logics. Pr...
Viktor Kuncak, Ruzica Piskac, Philippe Suter, Thom...
BMCBI
2006
115views more  BMCBI 2006»
15 years 6 months ago
Detecting recombination in evolving nucleotide sequences
Background: Genetic recombination can produce heterogeneous phylogenetic histories within a set of homologous genes. These recombination events can be obscured by subsequent resid...
Cheong Xin Chan, Robert G. Beiko, Mark A. Ragan
CVPR
2009
IEEE
17 years 1 months ago
A Similarity Measure Between Vector Sequences with Application to Handwritten Word Image Retrieval
This article proposes a novel similarity measure between vector sequences. Recently, a model-based approach was introduced to address this issue. It consists in modeling each se...
José A. Rodríguez-Serrano, Florent P...