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BMCBI
2010
175views more  BMCBI 2010»
15 years 7 months ago
Towards high performance computing for molecular structure prediction using IBM Cell Broadband Engine - an implementation perspe
Background: RNA structure prediction problem is a computationally complex task, especially with pseudo-knots. The problem is well-studied in existing literature and predominantly ...
S. P. T. Krishnan, Sim Sze Liang, Bharadwaj Veerav...
WWW
2011
ACM
15 years 2 months ago
A word at a time: computing word relatedness using temporal semantic analysis
Computing the degree of semantic relatedness of words is a key functionality of many language applications such as search, clustering, and disambiguation. Previous approaches to c...
Kira Radinsky, Eugene Agichtein, Evgeniy Gabrilovi...
ESCIENCE
2006
IEEE
16 years 1 months ago
Characterization of Computational Grid Resources Using Low-Level Benchmarks
An important factor that needs to be taken into account by end-users and systems (schedulers, resource brokers, policy brokers) when mapping applications to the Grid, is the perfo...
George Tsouloupas, Marios D. Dikaiakos
BMCBI
2006
122views more  BMCBI 2006»
15 years 7 months ago
Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle
Background: A transcriptional regulatory module (TRM) is a set of genes that is regulated by a common set of transcription factors (TFs). By organizing the genome into TRMs, a liv...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
SIGARCH
2008
73views more  SIGARCH 2008»
15 years 7 months ago
Servo: a programming model for many-core computing
Conventional programming models were designed to be used by expert programmers for programming for largescale multiprocessors, distributed computational clusters, or specialized p...
Nicolas Zea, John Sartori, Rakesh Kumar