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BMCBI
2010
96views more  BMCBI 2010»
15 years 6 months ago
ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data
Background: Chromatin immunoprecipitation (ChIP) followed by high-throughput sequencing (ChIP-seq) or ChIP followed by genome tiling array analysis (ChIP-chip) have become standar...
Lihua J. Zhu, Claude Gazin, Nathan D. Lawson, Herv...
ICDE
2004
IEEE
151views Database» more  ICDE 2004»
16 years 8 months ago
Improved File Synchronization Techniques for Maintaining Large Replicated Collections over Slow Networks
We study the problem of maintaining large replicated collections of files or documents in a distributed environment with limited bandwidth. This problem arises in a number of impo...
Torsten Suel, Patrick Noel, Dimitre Trendafilov
SIGSOFT
2001
ACM
16 years 7 months ago
WREN---an environment for component-based development
Prior research in software environments focused on three important problems-- tool integration, artifact management, and process guidance. The context for that research, and hence...
Chris Lüer, David S. Rosenblum
PPOPP
2009
ACM
16 years 7 months ago
MPIWiz: subgroup reproducible replay of mpi applications
Message Passing Interface (MPI) is a widely used standard for managing coarse-grained concurrency on distributed computers. Debugging parallel MPI applications, however, has alway...
Ruini Xue, Xuezheng Liu, Ming Wu, Zhenyu Guo, Weng...
ICS
2009
Tsinghua U.
16 years 1 months ago
/scratch as a cache: rethinking HPC center scratch storage
To sustain emerging data-intensive scientific applications, High Performance Computing (HPC) centers invest a notable fraction of their operating budget on a specialized fast sto...
Henry M. Monti, Ali Raza Butt, Sudharshan S. Vazhk...