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BMCBI
2004
156views more  BMCBI 2004»
15 years 6 months ago
DIALIGN P: Fast pair-wise and multiple sequence alignment using parallel processors
Background: Parallel computing is frequently used to speed up computationally expensive tasks in Bioinformatics. Results: Herein, a parallel version of the multi-alignment program...
Martin Schmollinger, Kay Nieselt, Michael Kaufmann...
HIPC
2009
Springer
15 years 4 months ago
Continuous performance monitoring for large-scale parallel applications
Traditional performance analysis techniques are performed after a parallel program has completed. In this paper, we describe an online method for continuously monitoring the perfor...
Isaac Dooley, Chee Wai Lee, Laxmikant V. Kal&eacut...
DAC
2008
ACM
16 years 7 months ago
Specify-explore-refine (SER): from specification to implementation
Driven by increasing complexity and reliability demands, the Japanese Aerospace Exploration Agency (JAXA) in 2004 commissioned development of ELEGANT, a complete SpecC-based envir...
Andreas Gerstlauer, Junyu Peng, Dongwan Shin, Dani...
IPSN
2010
Springer
16 years 1 months ago
Diagnostic powertracing for sensor node failure analysis
Troubleshooting unresponsive sensor nodes is a significant challenge in remote sensor network deployments. This paper introduces the tele-diagnostic powertracer, an in-situ troub...
Mohammad Maifi Hasan Khan, Hieu Khac Le, Michael L...
IEEEPACT
2009
IEEE
16 years 1 months ago
Quantifying the Potential of Program Analysis Peripherals
Abstract—As programmers are asked to manage more complicated parallel machines, it is likely that they will become increasingly dependent on tools such as multi-threaded data rac...
Mohit Tiwari, Shashidhar Mysore, Timothy Sherwood