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SAC
2010
ACM
15 years 6 months ago
Graph-based verification of static program constraints
Software artifacts usually have static program constraints and these constraints should be satisfied in each reuse. In addition to this, the developers are also required to satisf...
Selim Ciraci, Pim van den Broek, Mehmet Aksit
ASE
2007
143views more  ASE 2007»
15 years 6 months ago
Composition inference for UML class diagrams
Knowing which associations are compositions is important in a tool for the reverse engineering of UML class diagrams. Firstly, recovery of composition relationships bridges the ga...
Ana Milanova
BIODATAMINING
2008
178views more  BIODATAMINING 2008»
15 years 6 months ago
Clustering-based approaches to SAGE data mining
Serial analysis of gene expression (SAGE) is one of the most powerful tools for global gene expression profiling. It has led to several biological discoveries and biomedical appli...
Haiying Wang, Huiru Zheng, Francisco Azuaje
BMCBI
2010
106views more  BMCBI 2010»
15 years 6 months ago
A computational evaluation of over-representation of regulatory motifs in the promoter regions of differentially expressed genes
Background: Observed co-expression of a group of genes is frequently attributed to co-regulation by shared transcription factors. This assumption has led to the hypothesis that pr...
Guofeng Meng, Axel Mosig, Martin Vingron
BMCBI
2010
143views more  BMCBI 2010»
15 years 6 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...