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CODES
2009
IEEE
15 years 7 months ago
Efficient dynamic voltage/frequency scaling through algorithmic loop transformation
We present a novel loop transformation technique, particularly well suited for optimizing embedded compilers, where an increase in compilation time is acceptable in exchange for s...
Mohammad Ali Ghodrat, Tony Givargis
BMCBI
2010
172views more  BMCBI 2010»
15 years 6 months ago
Comparison of evolutionary algorithms in gene regulatory network model inference
Background: The evolution of high throughput technologies that measure gene expression levels has created a data base for inferring GRNs (a process also known as reverse engineeri...
Alina Sîrbu, Heather J. Ruskin, Martin Crane
BMCBI
2008
129views more  BMCBI 2008»
15 years 6 months ago
Gene set enrichment analysis for non-monotone association and multiple experimental categories
Background: Recently, microarray data analyses using functional pathway information, e.g., gene set enrichment analysis (GSEA) and significance analysis of function and expression...
Rongheng Lin, Shuangshuang Dai, Richard D. Irwin, ...
AI
2004
Springer
15 years 6 months ago
Order-sorted logic programming with predicate hierarchy
Order-sorted logic has been formalized as first-order logic with sorted terms where sorts are ordered to build a hierarchy (called a sort-hierarchy). These sorted logics lead to u...
Ken Kaneiwa
BMCBI
2004
149views more  BMCBI 2004»
15 years 6 months ago
MiCoViTo: a tool for gene-centric comparison and visualization of yeast transcriptome states
Background: Information obtained by DNA microarray technology gives a rough snapshot of the transcriptome state, i.e., the expression level of all the genes expressed in a cell po...
Gaëlle Lelandais, Philippe Marc, Pierre Vince...