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» The tao of parallelism in algorithms
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FCS
2006
15 years 8 months ago
A Theoretical Study of Parallel Voronoi Diagram
In this paper, we concentrate on the problem of computing a Voronoi diagram using Hypercube model of computation. The main contribution of this work is the O(log3 n) parallel algor...
Rashid Muhammad
ICPPW
2009
IEEE
15 years 4 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
PLDI
2012
ACM
13 years 9 months ago
Scalable and precise dynamic datarace detection for structured parallelism
Existing dynamic race detectors suffer from at least one of the following three limitations: (i) space overhead per memory location grows linearly with the number of parallel thre...
Raghavan Raman, Jisheng Zhao, Vivek Sarkar, Martin...
SDM
2009
SIAM
251views Data Mining» more  SDM 2009»
16 years 4 months ago
High Performance Parallel/Distributed Biclustering Using Barycenter Heuristic.
Biclustering refers to simultaneous clustering of objects and their features. Use of biclustering is gaining momentum in areas such as text mining, gene expression analysis and co...
Alok N. Choudhary, Arifa Nisar, Waseem Ahmad, Wei-...
BIBM
2009
IEEE
218views Bioinformatics» more  BIBM 2009»
16 years 1 months ago
Real-Time Non-rigid Registration of Medical Images on a Cooperative Parallel Architecture
Abstract—Unacceptable execution time of Non-rigid registration (NRR) often presents a major obstacle to its routine clinical use. Parallel computing is an effective way to accele...
Yixun Liu, Andriy Fedorov, Ron Kikinis, Nikos Chri...