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BMCBI
2008
179views more  BMCBI 2008»
15 years 6 months ago
Bayesian modeling of recombination events in bacterial populations
Background: We consider the discovery of recombinant segments jointly with their origins within multilocus DNA sequences from bacteria representing heterogeneous populations of fa...
Pekka Marttinen, Adam Baldwin, William P. Hanage, ...
BMCBI
2006
136views more  BMCBI 2006»
15 years 6 months ago
Java GUI for InterProScan (JIPS): A tool to help process multiple InterProScans and perform ortholog analysis
Background: Recent, rapid growth in the quantity of available genomic data has generated many protein sequences that are not yet biochemically classified. Thus, the prediction of ...
Aijazuddin Syed, Chris Upton
BMCBI
2005
79views more  BMCBI 2005»
15 years 6 months ago
Mathematical design of prokaryotic clone-based microarrays
Background: Clone-based microarrays, on which each spot represents a random genomic fragment, are a good alternative to open reading frame-based microarrays, especially for microo...
Bart Pieterse, Elisabeth J. Quirijns, Frank H. J. ...
LISP
2007
74views more  LISP 2007»
15 years 6 months ago
Improving the lazy Krivine machine
Krivine presents the K machine, which produces weak head normal form results. Sestoft introduces several call-by-need variants of the K machine that implement result sharing via pu...
Daniel P. Friedman, Abdulaziz Ghuloum, Jeremy G. S...
BMCBI
2002
120views more  BMCBI 2002»
15 years 6 months ago
tacg - a grep for DNA
Background: Pattern matching is the core of bioinformatics; it is used in database searching, restriction enzyme mapping, and finding open reading frames. It is done repeatedly ov...
Harry Mangalam