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BMCBI
2011
15 years 1 months ago
Simulated evolution applied to study the genetic code optimality using a model of codon reassignments
Background: As the canonical code is not universal, different theories about its origin and organization have appeared. The optimization or level of adaptation of the canonical ge...
Jose Santos, Ángel Monteagudo
CEC
2010
IEEE
15 years 1 months ago
Parameter estimation with term-wise decomposition in biochemical network GMA models by hybrid regularized Least Squares-Particle
High-throughput analytical techniques such as nuclear magnetic resonance, protein kinase phosphorylation, and mass spectroscopic methods generate time dense profiles of metabolites...
Prospero C. Naval, Luis G. Sison, Eduardo R. Mendo...
SIAMIS
2010
378views more  SIAMIS 2010»
15 years 1 months ago
Global Interactions in Random Field Models: A Potential Function Ensuring Connectedness
Markov random field (MRF) models, including conditional random field models, are popular in computer vision. However, in order to be computationally tractable, they are limited to ...
Sebastian Nowozin, Christoph H. Lampert
SIGMOD
2010
ACM
132views Database» more  SIGMOD 2010»
15 years 1 months ago
Durable top-k search in document archives
We propose and study a new ranking problem in versioned databases. Consider a database of versioned objects which have different valid instances along a history (e.g., documents i...
Leong Hou U, Nikos Mamoulis, Klaus Berberich, Srik...
BMCBI
2011
14 years 10 months ago
FFCA: a feasibility-based method for flux coupling analysis of metabolic networks
Background: Flux coupling analysis (FCA) is a useful method for finding dependencies between fluxes of a metabolic network at steady-state. FCA classifies reactions into subsets (...
László Dávid, Sayed-Amir Mara...
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