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BIOINFORMATICS
2010
170views more  BIOINFORMATICS 2010»
15 years 6 months ago
Joint estimation of DNA copy number from multiple platforms
DNA copy number variants (CNV) are gains and losses of segments of chromosomes, and comprise an important class of genetic variation. Recently, various microarray hybridization ba...
Nancy R. Zhang, Yasin Senbabaoglu, Jun Z. Li
BMCBI
2008
104views more  BMCBI 2008»
15 years 6 months ago
Comparison of methods for estimating the nucleotide substitution matrix
Background: The nucleotide substitution rate matrix is a key parameter of molecular evolution. Several methods for inferring this parameter have been proposed, with different math...
Maribeth Oscamou, Daniel McDonald, Von Bing Yap, G...
BMCBI
2008
121views more  BMCBI 2008»
15 years 6 months ago
ReAlignerV: Web-based genomic alignment tool with high specificity and robustness estimated by species-specific insertion sequen
Background: Detecting conserved noncoding sequences (CNSs) across species highlights the functional elements. Alignment procedures combined with computational prediction of transc...
Hisakazu Iwama, Yukio Hori, Kensuke Matsumoto, Koj...
TCOM
2008
84views more  TCOM 2008»
15 years 6 months ago
On the Performance of Closed-Loop Transmit Diversity with Noisy Channel Estimates and Finite-Depth Interleaved Convolutional Cod
Abstract-- In this paper, closed-form expressions for the uncoded bit error probability of closed-loop transmit diversity (CLTD) algorithms with two transmit and one receive antenn...
Jittra Jootar, James R. Zeidler, John G. Proakis
PEPM
2009
ACM
16 years 3 months ago
Guided model checking for programs with polymorphism
Exhaustive model checking search techniques are ineffective for error discovery in large and complex multi-threaded software systems. Distance estimate heuristics guide the concre...
Neha Rungta, Eric G. Mercer