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CGF
2008
142views more  CGF 2008»
15 years 6 months ago
Visualizing Genome Expression and Regulatory Network Dynamics in Genomic and Metabolic Context
DNA microarrays are used to measure the expression levels of thousands of genes simultaneously. In a time series experiment, the gene expressions are measured as a function of tim...
Michel A. Westenberg, Sacha A. F. T. van Hijum, Os...
ENVSOFT
2008
55views more  ENVSOFT 2008»
15 years 6 months ago
A simple algorithm for yield estimates: Evaluation for semi-arid irrigated winter wheat monitored with green leaf area index
In this study we investigated the perspective offered by coupling a simple vegetation growth model and ground-based remotely-sensed data for the monitoring of wheat production. A ...
Benoît Duchemin, Philippe Maisongrande, Gill...
BMCBI
2006
199views more  BMCBI 2006»
15 years 6 months ago
PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments
Background: Microarray technology has become a widely accepted and standardized tool in biology. The first microarray data analysis programs were developed to support pair-wise co...
Björn Usadel, Axel Nagel, Dirk Steinhauser, Y...
BMCBI
2006
86views more  BMCBI 2006»
15 years 6 months ago
MCALIGN2: Faster, accurate global pairwise alignment of non-coding DNA sequences based on explicit models of indel evolution
Background: Non-coding DNA sequences comprise a very large proportion of the total genomic content of mammals, most other vertebrates, many invertebrates, and most plants. Unravel...
Jun Wang, Peter D. Keightley, Toby Johnson
BMCBI
2006
110views more  BMCBI 2006»
15 years 6 months ago
Modelling the network of cell cycle transcription factors in the yeast Saccharomyces cerevisiae
Background: Reverse-engineering regulatory networks is one of the central challenges for computational biology. Many techniques have been developed to accomplish this by utilizing...
Shawn Cokus, Sherri Rose, David Haynor, Niels Gr&o...