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JBCB
2007
161views more  JBCB 2007»
15 years 6 months ago
On Cooperative Quasi-Equilibrium Models of transcriptional Regulation
Mechanistic models for transcriptional regulation are derived using the methods of equilibrium statistical mechanics, to model equilibrating processes that occur at a fast time sc...
Eric Mjolsness
ER
1995
Springer
152views Database» more  ER 1995»
15 years 10 months ago
A Logic Framework for a Semantics of Object-Oriented Data Modeling
We describe a (meta) formalism for defining a variety of (object oriented) data models in a unified framework based on a variation of first-order logic. As specific example we use...
Olga De Troyer, Robert Meersman
TIP
2008
133views more  TIP 2008»
15 years 6 months ago
A Recursive Model-Reduction Method for Approximate Inference in Gaussian Markov Random Fields
This paper presents recursive cavity modeling--a principled, tractable approach to approximate, near-optimal inference for large Gauss-Markov random fields. The main idea is to su...
Jason K. Johnson, Alan S. Willsky
LPKR
1997
Springer
15 years 11 months ago
Generalizing Updates: From Models to Programs
Abstract. Recently the field of theory update has seen some improvement, in what concerns model updating, by allowing updates to be specified by so-called revision programs. The ...
João Alexandre Leite, Luís Moniz Per...
BMCBI
2007
110views more  BMCBI 2007»
15 years 6 months ago
Analysis of feedback loops and robustness in network evolution based on Boolean models
Background: Many biological networks such as protein-protein interaction networks, signaling networks, and metabolic networks have topological characteristics of a scale-free degr...
Yung-Keun Kwon, Kwang-Hyun Cho