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BMCBI
2007
168views more  BMCBI 2007»
15 years 6 months ago
Bayesian model-based inference of transcription factor activity
Background: In many approaches to the inference and modeling of regulatory interactions using microarray data, the expression of the gene coding for the transcription factor is co...
Simon Rogers, Raya Khanin, Mark Girolami
NAR
2011
374views Computer Vision» more  NAR 2011»
15 years 29 days ago
The BioGRID Interaction Database: 2011 update
The Biological General Repository for Interaction Datasets (BioGRID) is a public database that archives and disseminates genetic and protein interaction data from model organisms ...
Chris Stark, Bobby-Joe Breitkreutz, Andrew Chatr-a...
ICDE
2007
IEEE
167views Database» more  ICDE 2007»
16 years 7 months ago
GString: A Novel Approach for Efficient Search in Graph Databases
Graphs are widely used for modeling complicated data, including chemical compounds, protein interactions, XML documents, and multimedia. Information retrieval against such data ca...
Haoliang Jiang, Haixun Wang, Philip S. Yu, Shuigen...
KDD
2005
ACM
162views Data Mining» more  KDD 2005»
16 years 6 months ago
Discovering frequent topological structures from graph datasets
The problem of finding frequent patterns from graph-based datasets is an important one that finds applications in drug discovery, protein structure analysis, XML querying, and soc...
Ruoming Jin, Chao Wang, Dmitrii Polshakov, Sriniva...
AIMSA
2004
Springer
15 years 12 months ago
PubMiner: Machine Learning-Based Text Mining System for Biomedical Information Mining
PubMiner, an intelligent machine learning based text mining system for mining biological information from the literature is introduced. PubMiner utilize natural language processing...
Jae-Hong Eom, Byoung-Tak Zhang