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» The Protein Data Bank and lessons in data management
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DAWAK
2000
Springer
15 years 10 months ago
COFE: A Scalable Method for Feature Extraction from Complex Objects
Abstract. Feature Extraction, also known as Multidimensional Scaling, is a basic primitive associated with indexing, clustering, nearest neighbor searching and visualization. We co...
Gabriela Hristescu, Martin Farach-Colton
ITSSA
2006
182views more  ITSSA 2006»
15 years 6 months ago
Application of Business Process Execution Language to Scientific Workflows
: This paper investigates the use of the Business Process Execution Language for Web services (BPEL4WS/ BPEL) for managing scientific workflows. The complexity, unpredictability an...
Asif Akram, David Meredith, Rob Allan
ICDT
2003
ACM
150views Database» more  ICDT 2003»
15 years 11 months ago
Bioinformatics Adventures in Database Research
Informatics has helped launch molecular biology into the genomic era. It appears certain that informatics will remain a major contributor to molecular biology in the post-genome er...
Jinyan Li, See-Kiong Ng, Limsoon Wong
BMCBI
2010
121views more  BMCBI 2010»
15 years 3 months ago
A grammar-based distance metric enables fast and accurate clustering of large sets of 16S sequences
Background: We propose a sequence clustering algorithm and compare the partition quality and execution time of the proposed algorithm with those of a popular existing algorithm. T...
David J. Russell, Samuel F. Way, Andrew K. Benson,...
NAR
2006
83views more  NAR 2006»
15 years 6 months ago
KOBAS server: a web-based platform for automated annotation and pathway identification
There is an increasing need to automatically annotate a set of genes or proteins (from genome sequencing, DNA microarray analysis or protein 2D gel experiments) using controlled v...
Jianmin Wu, Xizeng Mao, Tao Cai, Jingchu Luo, Lipi...