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BMCBI
2010
181views more  BMCBI 2010»
15 years 7 months ago
Intensity dependent estimation of noise in microarrays improves detection of differentially expressed genes
Background: In many microarray experiments, analysis is severely hindered by a major difficulty: the small number of samples for which expression data has been measured. When one ...
Amit Zeisel, Amnon Amir, Wolfgang J. Köstler,...
IEEEHPCS
2010
15 years 5 months ago
CuHMMer: A load-balanced CPU-GPU cooperative bioinformatics application
Abstract—GPUs have recently been used to accelerate dataparallel applications for they provide easier programmability and increased generality while maintaining the tremendous me...
Ping Yao, Hong An, Mu Xu, Gu Liu, Xiaoqiang Li, Ya...
BMCBI
2007
120views more  BMCBI 2007»
15 years 7 months ago
Re-sampling strategy to improve the estimation of number of null hypotheses in FDR control under strong correlation structures
Background: When conducting multiple hypothesis tests, it is important to control the number of false positives, or the False Discovery Rate (FDR). However, there is a tradeoff be...
Xin Lu, David L. Perkins
CEC
2005
IEEE
16 years 14 days ago
Multiobjective clustering around medoids
Abstract- The large majority of existing clustering algorithms are centered around the notion of a feature, that is, individual data items are represented by their intrinsic proper...
Julia Handl, Joshua D. Knowles
SIGMOD
2010
ACM
598views Database» more  SIGMOD 2010»
15 years 11 months ago
Ricardo: integrating R and Hadoop
Many modern enterprises are collecting data at the most detailed level possible, creating data repositories ranging from terabytes to petabytes in size. The ability to apply sophi...
Sudipto Das, Yannis Sismanis, Kevin S. Beyer, Rain...