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BMCBI
2008
128views more  BMCBI 2008»
15 years 6 months ago
SIGffRid: A tool to search for sigma factor binding sites in bacterial genomes using comparative approach and biologically drive
Background: Many programs have been developed to identify transcription factor binding sites. However, most of them are not able to infer two-word motifs with variable spacer leng...
Fabrice Touzain, Sophie Schbath, Isabelle Debled-R...
SCAM
2003
IEEE
15 years 12 months ago
XOgastan: XML-Oriented gcc AST Analysis and Transformations
Software maintenance, program analysis and transformation tools almost always rely on static source code analysis as the first and fundamental step to gather information. In the ...
Giuliano Antoniol, Massimiliano Di Penta, Gianluca...
AOSD
2003
ACM
15 years 12 months ago
Navigating and querying code without getting lost
A development task related to a crosscutting concern is challenging because a developer can easily get lost when exploring scattered elements of code and the complex tangle of rel...
Doug Janzen, Kris De Volder
157
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LREC
2010
121views Education» more  LREC 2010»
15 years 8 months ago
Ngram Search Engine with Patterns Combining Token, POS, Chunk and NE Information
We developed a search tool for ngrams extracted from a very large corpus (the current system uses the entire Wikipedia, which has
Satoshi Sekine, Kapil Dalwani
ICSM
2005
IEEE
16 years 9 days ago
The Role of Refactorings in API Evolution
Frameworks and libraries change their APIs. Migrating an application to the new API is tedious and disrupts the development process. Although some tools and ideas have been propos...
Danny Dig, Ralph Johnson