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» The Language of Cortical Dynamics
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BMCBI
2010
149views more  BMCBI 2010»
15 years 6 months ago
RuleMonkey: software for stochastic simulation of rule-based models
Background: The system-level dynamics of many molecular interactions, particularly protein-protein interactions, can be conveniently represented using reaction rules, which can be...
Joshua Colvin, Michael I. Monine, Ryan N. Gutenkun...
CACM
2008
131views more  CACM 2008»
15 years 6 months ago
Exterminator: Automatically correcting memory errors with high probability
Programs written in C and C++ are susceptible to memory errors, including buffer overflows and dangling pointers. These errors, which can lead to crashes, erroneous execution, and...
Gene Novark, Emery D. Berger, Benjamin G. Zorn
BMCBI
2007
147views more  BMCBI 2007»
15 years 6 months ago
Modeling biochemical transformation processes and information processing with Narrator
Background: Software tools that model and simulate the dynamics of biological processes and systems are becoming increasingly important. Some of these tools offer sophisticated gr...
Johannes J. Mandel, Hendrik Fuß, Niall M. Pa...
JFP
2006
78views more  JFP 2006»
15 years 6 months ago
Sound and complete models of contracts
Even in statically typed languages it is useful to have certain invariants checked dynamically. Findler and Felleisen gave an algorithm for dynamically checking expressive highero...
Matthias Blume, David A. McAllester
AES
2008
Springer
97views Cryptology» more  AES 2008»
15 years 5 months ago
Software mechanisms for extensible and scalable 3D visualization of construction operations
This paper presents research that led to the design and implementation of an extensible and scalable software framework for the dynamic 3D visualization of simulated construction ...
Vineet R. Kamat, Julio C. Martínez