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» The LIFEdb database in 2006
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BIOCOMP
2006
15 years 7 months ago
Mapping Biological XML DTDs Using Ontology
Several biological databases exist which use different formats for storing data. Further, each database has its own schema and a query interface. There exist no standard conversio...
Rana Hashmy
BMCBI
2006
172views more  BMCBI 2006»
15 years 6 months ago
BioWarehouse: a bioinformatics database warehouse toolkit
Background: This article addresses the problem of interoperation of heterogeneous bioinformatics databases. Results: We introduce BioWarehouse, an open source toolkit for construc...
Thomas J. Lee, Yannick Pouliot, Valerie Wagner, Pr...
BMCBI
2006
115views more  BMCBI 2006»
15 years 6 months ago
AgdbNet - antigen sequence database software for bacterial typing
Background: Bacterial typing schemes based on the sequences of genes encoding surface antigens require databases that provide a uniform, curated, and widely accepted nomenclature ...
Keith A. Jolley, Martin C. J. Maiden
BMCBI
2006
116views more  BMCBI 2006»
15 years 6 months ago
MICA: desktop software for comprehensive searching of DNA databases
Background: Molecular biologists work with DNA databases that often include entire genomes. A common requirement is to search a DNA database to find exact matches for a nondegener...
William A. Stokes, Benjamin S. Glick
ER
2006
Springer
158views Database» more  ER 2006»
15 years 10 months ago
Database to Semantic Web Mapping Using RDF Query Languages
One of the main drawbacks of the Semantic Web is the lack of semantically rich data, since most of the information is still stored in relational databases. In this paper, we presen...
Cristian Pérez de Laborda, Stefan Conrad