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BMCBI
2008
97views more  BMCBI 2008»
15 years 7 months ago
MCM-test: a fuzzy-set-theory-based approach to differential analysis of gene pathways
Background: Gene pathway can be defined as a group of genes that interact with each other to perform some biological processes. Along with the efforts to identify the individual g...
Lily R. Liang, Vinay Mandal, Yi Lu, Deepak Kumar
BMCBI
2008
97views more  BMCBI 2008»
15 years 7 months ago
Quantitative analysis of numerical solvers for oscillatory biomolecular system models
Background: This article provides guidelines for selecting optimal numerical solvers for biomolecular system models. Because various parameters of the same system could have drast...
Chang F. Quo, May D. Wang
173
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BMCBI
2008
171views more  BMCBI 2008»
15 years 7 months ago
Comparative analysis of five protein-protein interaction corpora
Background: Growing interest in the application of natural language processing methods to biomedical text has led to an increasing number of corpora and methods targeting protein-...
Sampo Pyysalo, Antti Airola, Juho Heimonen, Jari B...
BMCBI
2008
149views more  BMCBI 2008»
15 years 7 months ago
All-paths graph kernel for protein-protein interaction extraction with evaluation of cross-corpus learning
Background: Automated extraction of protein-protein interactions (PPI) is an important and widely studied task in biomedical text mining. We propose a graph kernel based approach ...
Antti Airola, Sampo Pyysalo, Jari Björne, Tap...
CACM
2008
101views more  CACM 2008»
15 years 7 months ago
Just say 'A Class Defines a Data Type'
data type and (Java) class, asking about the relationship between them. The same students would also be unlikely to find an answer in a CS1 textbook. Some textbooks might not even ...
Chenglie Hu
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