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INFOSCALE
2006
ACM
16 years 15 days ago
Scalable hardware accelerator for comparing DNA and protein sequences
Abstract— Comparing genetic sequences is a well-known problem in bioinformatics. Newly determined sequences are being compared to known sequences stored in databases in order to ...
Philippe Faes, Bram Minnaert, Mark Christiaens, Er...
HIPEAC
2009
Springer
15 years 10 months ago
Deriving Efficient Data Movement from Decoupled Access/Execute Specifications
Abstract. On multi-core architectures with software-managed memories, effectively orchestrating data movement is essential to performance, but is tedious and error-prone. In this p...
Lee W. Howes, Anton Lokhmotov, Alastair F. Donalds...
HICSS
2005
IEEE
117views Biometrics» more  HICSS 2005»
16 years 5 days ago
MobCon: A Generative Middleware Framework for Java Mobile Applications
While dedicated technologies such as e.g., Sun’s J2ME MIDP offer a simple programming model for mobile applications, appropriate support for modularizing the implementation of t...
Vasian Cepa, Mira Mezini
IPPS
2005
IEEE
16 years 4 days ago
MOCCA - Towards a Distributed CCA Framework for Metacomputing
— We describe the design and implementation of MOCCA, a distributed CCA framework implemented using the H2O metacomputing system. Motivated by the quest for appropriate metasyste...
Maciej Malawski, Dawid Kurzyniec, Vaidy S. Sundera...
ICALP
2009
Springer
16 years 6 months ago
Fast FAST
We present a randomized subexponential time, polynomial space parameterized algorithm for the k-Weighted Feedback Arc Set in Tournaments (k-FAST) problem. We also show that our alg...
Noga Alon, Daniel Lokshtanov, Saket Saurabh